STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3870KEGG: hne:HNE_1566 hypothetical protein. (184 aa)    
Predicted Functional Partners:
hmp
Oxidoreductase FAD/NAD(P)-binding domain protein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
  
  
 0.942
Caul_3866
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: hne:HNE_1562 nitrate reductase molybdenum cofactor assembly chaperone.
 
   
 0.879
Caul_3868
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: hne:HNE_1565 putative peptidylprolyl cis-trans isomerase.
 
     0.879
Caul_3861
PFAM: cyclic nucleotide-binding; KEGG: hne:HNE_1558 cyclic nucleotide binding protein.
 
  
 0.851
Caul_3863
PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_2890 nitrite transporter.
 
   
 0.851
Caul_3867
KEGG: hne:HNE_1564 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit.
 
   
 0.838
Caul_3862
PFAM: major facilitator superfamily MFS_1; KEGG: hne:HNE_1559 nitrite extrusion protein.
 
   
 0.833
Caul_3864
KEGG: hne:HNE_1560 nitrate reductase, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.807
Caul_3865
TIGRFAM: nitrate reductase, beta subunit; KEGG: hne:HNE_1561 nitrate reductase, beta subunit.
 
     0.795
Caul_3871
PFAM: carbonic anhydrase; KEGG: hne:HNE_1567 carbonic anhydrase.
       0.783
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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