STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4301TIGRFAM: esterase, PHB depolymerase family; KEGG: rpb:RPB_0711 esterase, PHB depolymerase. (368 aa)    
Predicted Functional Partners:
Caul_1021
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: ccr:CC_3042 endo-1,4-beta-xylanase.
 
 
 0.524
Caul_1844
PFAM: glycoside hydrolase family 10; KEGG: ccr:CC_2803 glycosyl hydrolase, family 10.
 
 
 0.511
Caul_4302
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: nar:Saro_0180 hemerythrin HHE cation binding region protein.
       0.495
Caul_2405
KEGG: fgr:FG11532.1 hypothetical protein.
 
 
 
 0.464
Caul_2411
PFAM: putative esterase; KEGG: sus:Acid_2994 putative esterase.
   
   0.441
Caul_0156
PFAM: Ricin B lectin; KEGG: xau:Xaut_1731 ricin B lectin.
 
     0.413
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.