STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4342PFAM: NUDIX hydrolase; KEGG: ccr:CC_0418 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. (156 aa)    
Predicted Functional Partners:
Caul_4343
Hypothetical protein.
       0.768
Caul_4345
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.523
Caul_4341
PFAM: Aldehyde dehydrogenase; KEGG: ccr:CC_0419 aldehyde dehydrogenase.
       0.513
Caul_4344
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_0417 short chain dehydrogenase.
       0.502
Caul_4346
KEGG: ccr:CC_0415 hypothetical protein.
       0.480
Caul_2744
KEGG: pla:Plav_0737 hypothetical protein.
  
     0.426
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.