Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4591PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ccr:CC_0111 DNA-binding protein, putative. (168 aa)    
Predicted Functional Partners:
Caul_4592
KEGG: esa:ESA_02045 hypothetical protein.
       0.768
Caul_4593
KEGG: ccr:CC_0112 hypothetical protein.
 
     0.675
Caul_4590
TIGRFAM: thioredoxin; PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: ccr:CC_0110 thioredoxin.
       0.604
Caul_4589
PFAM: peptidase S16 lon domain protein; KEGG: ccr:CC_0109 ATP-dependent protease La domain protein.
       0.603
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.
    
 0.527
Caul_4588
PFAM: protein of unknown function DUF343; KEGG: ccr:CC_0108 hypothetical protein; Belongs to the UPF0434 family.
 
     0.507
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 
 0.469
Caul_3036
KEGG: ccr:CC_1366 hypothetical protein.
  
     0.445
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.