STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4650Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: ccr:CC_0247 response regulator. (185 aa)    
Predicted Functional Partners:
Caul_4651
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ccr:CC_0248 sensor histidine kinase.
 
 0.995
Caul_3601
KEGG: ccr:CC_2349 hypothetical protein.
  
     0.678
Caul_0390
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ccr:CC_0530 sensor histidine kinase.
 
 
 
 0.572
Caul_3549
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: mlo:mll2384 probable sensor/response regulator hybrid protein.
 
 
 0.567
Caul_4652
PFAM: electron transport protein SCO1/SenC; KEGG: ccr:CC_0249 SCO1/2 family protein.
  
  
 0.554
Caul_3548
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_0712 sensor histidine kinase/response regulator.
   
 
 0.515
Caul_3769
KEGG: ccr:CC_2670 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
 
 0.498
Caul_5036
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ccr:CC_3743 DNA-binding response regulator.
  
 
 
 0.471
Caul_1662
PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: ccr:CC_2237 putative deoxycytidine triphosphate deaminase protein.
  
     0.450
Caul_3298
KEGG: hau:Haur_2137 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     
 0.446
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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