STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4694PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0214 TonB-dependent receptor. (685 aa)    
Predicted Functional Partners:
Caul_1911
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_0730 TonB-dependent receptor.
  
   
 0.712
Caul_0504
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spl:Spea_2843 TonB-dependent receptor.
  
   
 0.705
Caul_1136
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_0964 TonB-dependent receptor.
  
   
 0.700
Caul_2647
PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: swi:Swit_0680 TonB-dependent receptor.
  
   
 0.700
Caul_0572
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_4282 TonB-dependent receptor, plug.
  
  
 0.696
Caul_4338
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_3336 TonB-dependent receptor, putative.
  
   
 0.687
Caul_0429
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1901 TonB-dependent receptor.
  
   
 0.678
Caul_3243
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1656 TonB-dependent receptor.
  
   
 0.676
Caul_1889
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hne:HNE_1466 putative TonB dependent receptor.
  
   
 0.672
Caul_1908
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_5045 TonB-dependent receptor.
  
   
 0.670
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.