STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4769PFAM: flavodoxin/nitric oxide synthase; KEGG: bvi:Bcep1808_0297 flavodoxin/nitric oxide synthase. (201 aa)    
Predicted Functional Partners:
Caul_4332
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: azc:AZC_4089 flavoprotein.
  
  
 
0.927
Caul_0456
PFAM: flavodoxin/nitric oxide synthase; KEGG: atc:AGR_L_1309 hypothetical protein.
  
  
 
0.910
Caul_2450
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bca:BCE_5095 NAD(P)H dehydrogenase, quinone family.
    
 0.910
Caul_1880
KEGG: rso:RS05352 hypothetical protein.
    
  0.901
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
Caul_4306
PFAM: Ferritin Dps family protein; KEGG: ccr:CC_2873 Dps family protein; Belongs to the Dps family.
  
  
 0.549
Caul_5022
KEGG: ccr:CC_3757 hypothetical protein.
   
  
 0.511
Caul_0211
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.466
Caul_4770
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_0133 oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.461
Caul_3900
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ccr:CC_2772 DnaJ family protein.
   
  
 0.437
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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