STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG51_02305MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)    
Predicted Functional Partners:
CG51_08490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.810
CG51_00970
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.787
CG51_02310
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.474
CG51_03955
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.469
CG51_17260
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.436
CG51_00660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.435
CG51_07760
Glycoside hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.435
CG51_14860
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.435
CG51_07285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.431
CG51_13160
Hypothetical protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.428
Your Current Organism:
Haematobacter missouriensis
NCBI taxonomy Id: 366616
Other names: CCUG 52307, CIP 109176, H. missouriensis, Haematobacter missouriensis Helsel et al. 2007, strain H1892
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.