STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG51_03900Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)    
Predicted Functional Partners:
CG51_19320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.902
CG51_12695
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.853
CG51_18340
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.853
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.806
CG51_02375
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.769
CG51_03905
CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.517
CG51_17250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.506
CG51_03895
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.494
CG51_15395
NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.454
CG51_06855
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.440
Your Current Organism:
Haematobacter missouriensis
NCBI taxonomy Id: 366616
Other names: CCUG 52307, CIP 109176, H. missouriensis, Haematobacter missouriensis Helsel et al. 2007, strain H1892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.