STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG51_10095Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
CG51_10895
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.984
CG51_10100
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
  
  
 0.940
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.818
rppH
RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
   
   0.776
CG51_11305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.750
CG51_19740
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.747
CG51_00500
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.722
CG51_10240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.706
CG51_03335
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.705
CG51_04015
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.681
Your Current Organism:
Haematobacter missouriensis
NCBI taxonomy Id: 366616
Other names: CCUG 52307, CIP 109176, H. missouriensis, Haematobacter missouriensis Helsel et al. 2007, strain H1892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.