STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG51_16180GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
CG51_16155
HyuE hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
CG51_16170
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
CG51_16160
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
CG51_16165
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
CG51_16175
Spermidine/putrescine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
     0.728
CG51_00390
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
CG51_14575
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
CG51_09000
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
CG51_07470
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
CG51_02425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.571
Your Current Organism:
Haematobacter missouriensis
NCBI taxonomy Id: 366616
Other names: CCUG 52307, CIP 109176, H. missouriensis, Haematobacter missouriensis Helsel et al. 2007, strain H1892
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.