STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG51_19685Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
CG51_11105
Glycoprotein-polysaccharide metabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.864
CG51_05575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.830
CG51_17720
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.729
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.719
CG51_10380
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.
   
 
  0.658
CG51_14200
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.
    
  0.650
CG51_06010
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.581
CG51_19680
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
   
 
 0.532
surE
Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.514
Your Current Organism:
Haematobacter missouriensis
NCBI taxonomy Id: 366616
Other names: CCUG 52307, CIP 109176, H. missouriensis, Haematobacter missouriensis Helsel et al. 2007, strain H1892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.