Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NCU00470 | NCU00865 | U9W3J3 | Q7SFG6 | DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. | Oxalate decarboxylase oxdC. | 0.744 |
NCU00470 | NCU05848 | U9W3J3 | Q7S560 | DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. | Cytochrome P450 monooxygenase. | 0.690 |
NCU00865 | NCU00470 | Q7SFG6 | U9W3J3 | Oxalate decarboxylase oxdC. | DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. | 0.744 |
NCU00865 | NCU05848 | Q7SFG6 | Q7S560 | Oxalate decarboxylase oxdC. | Cytochrome P450 monooxygenase. | 0.663 |
NCU02894 | NCU05848 | Q7SHL0 | Q7S560 | Flavin-binding monooxygenase. | Cytochrome P450 monooxygenase. | 0.494 |
NCU03049 | NCU05848 | Q7SD22 | Q7S560 | Flavin-binding monooxygenase. | Cytochrome P450 monooxygenase. | 0.494 |
NCU05188 | NCU05848 | Q7S8D7 | Q7S560 | FAD monooxygenase. | Cytochrome P450 monooxygenase. | 0.428 |
NCU05848 | NCU00470 | Q7S560 | U9W3J3 | Cytochrome P450 monooxygenase. | DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. | 0.690 |
NCU05848 | NCU00865 | Q7S560 | Q7SFG6 | Cytochrome P450 monooxygenase. | Oxalate decarboxylase oxdC. | 0.663 |
NCU05848 | NCU02894 | Q7S560 | Q7SHL0 | Cytochrome P450 monooxygenase. | Flavin-binding monooxygenase. | 0.494 |
NCU05848 | NCU03049 | Q7S560 | Q7SD22 | Cytochrome P450 monooxygenase. | Flavin-binding monooxygenase. | 0.494 |
NCU05848 | NCU05188 | Q7S560 | Q7S8D7 | Cytochrome P450 monooxygenase. | FAD monooxygenase. | 0.428 |
NCU05848 | NCU05885 | Q7S560 | Q7S523 | Cytochrome P450 monooxygenase. | Flavin-binding monooxygenase. | 0.502 |
NCU05848 | NCU10285 | Q7S560 | A7UXE2 | Cytochrome P450 monooxygenase. | Benzoate 4-monooxygenase cytochrome P450. | 0.486 |
NCU05848 | csr-1 | Q7S560 | P10255 | Cytochrome P450 monooxygenase. | Peptidyl-prolyl cis-trans isomerase, mitochondrial; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | 0.489 |
NCU05848 | nit-13 | Q7S560 | Q7SE17 | Cytochrome P450 monooxygenase. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.537 |
NCU05848 | pim1 | Q7S560 | Q7S8C4 | Cytochrome P450 monooxygenase. | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | 0.485 |
NCU05885 | NCU05848 | Q7S523 | Q7S560 | Flavin-binding monooxygenase. | Cytochrome P450 monooxygenase. | 0.502 |
NCU10285 | NCU05848 | A7UXE2 | Q7S560 | Benzoate 4-monooxygenase cytochrome P450. | Cytochrome P450 monooxygenase. | 0.486 |
csr-1 | NCU05848 | P10255 | Q7S560 | Peptidyl-prolyl cis-trans isomerase, mitochondrial; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. | Cytochrome P450 monooxygenase. | 0.489 |
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