Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NCU01745 | NCU01747 | Q1K5R9 | Q1K5R7 | SPX domain-containing protein. | Glycerophosphocholine phosphodiesterase Gde1. | 0.729 |
NCU01745 | NCU01843 | Q1K5R9 | F5HG81 | SPX domain-containing protein. | T-complex protein 1 subunit gamma. | 0.540 |
NCU01745 | NCU02839 | Q1K5R9 | Q7RV38 | SPX domain-containing protein. | T-complex protein 1 subunit delta. | 0.540 |
NCU01745 | NCU03883 | Q1K5R9 | Q7RXG7 | SPX domain-containing protein. | Vacuolar transporter chaperone 1. | 0.803 |
NCU01745 | NCU03950 | Q1K5R9 | Q7RU98 | SPX domain-containing protein. | SPX domain-containing protein. | 0.623 |
NCU01745 | NCU04448 | Q1K5R9 | Q7RWB8 | SPX domain-containing protein. | T-complex protein 1 subunit alpha. | 0.540 |
NCU01745 | NCU08110 | Q1K5R9 | Q7SCX0 | SPX domain-containing protein. | Vacuolar transporter chaperone 4. | 0.797 |
NCU01745 | NCU09709 | Q1K5R9 | Q7S2R7 | SPX domain-containing protein. | T-complex protein 1 subunit zeta. | 0.540 |
NCU01745 | nuc-2 | Q1K5R9 | Q01317 | SPX domain-containing protein. | Ankyrin repeat protein nuc-2; Controls phosphorus acquisition. | 0.799 |
NCU01745 | pho-4 | Q1K5R9 | P15710 | SPX domain-containing protein. | Phosphate-repressible phosphate permease pho-4; High-affinity transporter for external inorganic phosphate. Acts probably as a sodium-phosphate symporter. Component of the high affinity phosphate transport system II (ptsII) necessary for scavenging phosphorus from the environment under conditions of limiting phosphorus; Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. | 0.581 |
NCU01747 | NCU01745 | Q1K5R7 | Q1K5R9 | Glycerophosphocholine phosphodiesterase Gde1. | SPX domain-containing protein. | 0.729 |
NCU01747 | NCU03883 | Q1K5R7 | Q7RXG7 | Glycerophosphocholine phosphodiesterase Gde1. | Vacuolar transporter chaperone 1. | 0.619 |
NCU01747 | NCU03950 | Q1K5R7 | Q7RU98 | Glycerophosphocholine phosphodiesterase Gde1. | SPX domain-containing protein. | 0.709 |
NCU01747 | NCU08110 | Q1K5R7 | Q7SCX0 | Glycerophosphocholine phosphodiesterase Gde1. | Vacuolar transporter chaperone 4. | 0.729 |
NCU01747 | nuc-2 | Q1K5R7 | Q01317 | Glycerophosphocholine phosphodiesterase Gde1. | Ankyrin repeat protein nuc-2; Controls phosphorus acquisition. | 0.886 |
NCU01747 | pho-4 | Q1K5R7 | P15710 | Glycerophosphocholine phosphodiesterase Gde1. | Phosphate-repressible phosphate permease pho-4; High-affinity transporter for external inorganic phosphate. Acts probably as a sodium-phosphate symporter. Component of the high affinity phosphate transport system II (ptsII) necessary for scavenging phosphorus from the environment under conditions of limiting phosphorus; Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. | 0.635 |
NCU01843 | NCU01745 | F5HG81 | Q1K5R9 | T-complex protein 1 subunit gamma. | SPX domain-containing protein. | 0.540 |
NCU01843 | NCU02839 | F5HG81 | Q7RV38 | T-complex protein 1 subunit gamma. | T-complex protein 1 subunit delta. | 0.999 |
NCU01843 | NCU03883 | F5HG81 | Q7RXG7 | T-complex protein 1 subunit gamma. | Vacuolar transporter chaperone 1. | 0.540 |
NCU01843 | NCU03950 | F5HG81 | Q7RU98 | T-complex protein 1 subunit gamma. | SPX domain-containing protein. | 0.540 |
page 1 of 5