STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tca-16Malate dehydrogenase. (331 aa)    
Predicted Functional Partners:
tca-2
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
NCU08411
Aspartate aminotransferase.
   
 0.989
cit-1
Citrate synthase, mitochondrial.
  
 0.986
tca-14
Fumarate hydratase.
  
 0.984
acu-9
Malate synthase, glyoxysomal.
   
 0.976
NCU07941
Aspartate aminotransferase.
   
 0.976
suc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.975
NCU03651
NADP-dependent malic enzyme, variant.
  
 0.973
B14D6.310
Probable ATP-citrate synthase subunit 1; Catalyzes the formation of cytosolic acetyl-CoA, which is mainly used for the biosynthesis of fatty acids and sterols. Belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.964
NCU06783
ATP citrate lyase, variant.
  
 0.964
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A
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