Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NCU01240 | NCU06261 | V5IMX0 | Q7SB52 | Uncharacterized protein. | Uracil phosphoribosyltransferase. | 0.581 |
NCU01240 | rib-3 | V5IMX0 | V5ILK6 | Uncharacterized protein. | GTP cyclohydrolase II, variant. | 0.927 |
NCU06261 | NCU01240 | Q7SB52 | V5IMX0 | Uracil phosphoribosyltransferase. | Uncharacterized protein. | 0.581 |
NCU06261 | NCU17060 | Q7SB52 | V5IKK9 | Uracil phosphoribosyltransferase. | DRAP deaminase. | 0.401 |
NCU06261 | rib-3 | Q7SB52 | V5ILK6 | Uracil phosphoribosyltransferase. | GTP cyclohydrolase II, variant. | 0.642 |
NCU09371 | NCU17060 | Q7RVJ3 | V5IKK9 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | DRAP deaminase. | 0.501 |
NCU09371 | bud4 | Q7RVJ3 | U9W4W6 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | GTP binding protein. | 0.754 |
NCU09371 | crn | Q7RVJ3 | Q7RXM4 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Coronin; Belongs to the WD repeat coronin family. | 0.754 |
NCU09371 | pan-4 | Q7RVJ3 | Q7S8P2 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Pantoate-beta-alanine ligase. | 0.933 |
NCU09371 | rib-3 | Q7RVJ3 | V5ILK6 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | GTP cyclohydrolase II, variant. | 0.858 |
NCU09371 | rib-5 | Q7RVJ3 | Q7SD50 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Riboflavin synthase subunit alpha. | 0.999 |
NCU17060 | NCU06261 | V5IKK9 | Q7SB52 | DRAP deaminase. | Uracil phosphoribosyltransferase. | 0.401 |
NCU17060 | NCU09371 | V5IKK9 | Q7RVJ3 | DRAP deaminase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.501 |
NCU17060 | rib-3 | V5IKK9 | V5ILK6 | DRAP deaminase. | GTP cyclohydrolase II, variant. | 0.514 |
NCU17060 | rib-5 | V5IKK9 | Q7SD50 | DRAP deaminase. | Riboflavin synthase subunit alpha. | 0.526 |
alc-1 | rib-3 | P18407 | V5ILK6 | Allantoicase; Utilization of purines as secondary nitrogen sources, when primary sources are limiting; Belongs to the allantoicase family. | GTP cyclohydrolase II, variant. | 0.606 |
bud4 | NCU09371 | U9W4W6 | Q7RVJ3 | GTP binding protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.754 |
bud4 | crn | U9W4W6 | Q7RXM4 | GTP binding protein. | Coronin; Belongs to the WD repeat coronin family. | 0.468 |
bud4 | rib-3 | U9W4W6 | V5ILK6 | GTP binding protein. | GTP cyclohydrolase II, variant. | 0.655 |
bud4 | rib-5 | U9W4W6 | Q7SD50 | GTP binding protein. | Riboflavin synthase subunit alpha. | 0.884 |
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