STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720925_01318Unannotated protein. (542 aa)    
Predicted Functional Partners:
GCA_000720925_01319
Unannotated protein.
  0.997
GCA_000720925_01320
Unannotated protein.
 
    0.951
GCA_000720925_01321
Unannotated protein.
 
    0.940
GCA_000720925_01322
Unannotated protein.
 
     0.939
GCA_000720925_00109
Unannotated protein.
   
  0.724
GCA_000720925_01780
Unannotated protein.
   
  0.724
GCA_000720925_02946
Unannotated protein.
   
  0.724
GCA_000720925_01323
Unannotated protein.
       0.705
GCA_000720925_01967
Unannotated protein.
    
   0.699
GCA_000720925_01421
Unannotated protein.
    
  0.668
Your Current Organism:
Phycicoccus jejuensis
NCBI taxonomy Id: 367299
Other names: JCM 15616, KCCM 42315, NRRL B-24460, P. jejuensis, Phycicoccus jejuensis Lee 2006, strain KSW2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.