STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720925_01989Unannotated protein. (657 aa)    
Predicted Functional Partners:
GCA_000720925_01997
Unannotated protein.
    0.944
GCA_000720925_02438
Unannotated protein.
   
    0.762
GCA_000720925_03002
Unannotated protein.
   
    0.762
GCA_000720925_01702
Unannotated protein.
  
     0.642
GCA_000720925_01988
Unannotated protein.
  
    0.550
GCA_000720925_03253
Unannotated protein.
  
  
 0.484
GCA_000720925_03224
Unannotated protein.
   
 
  0.446
Your Current Organism:
Phycicoccus jejuensis
NCBI taxonomy Id: 367299
Other names: JCM 15616, KCCM 42315, NRRL B-24460, P. jejuensis, Phycicoccus jejuensis Lee 2006, strain KSW2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.