STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720925_02412Unannotated protein. (314 aa)    
Predicted Functional Partners:
GCA_000720925_02413
Unannotated protein.
 
     0.864
GCA_000720925_03032
Unannotated protein.
  
 
 0.770
GCA_000720925_02615
Unannotated protein.
  
 
 0.738
GCA_000720925_00536
Unannotated protein.
    
 0.734
GCA_000720925_00171
Unannotated protein.
  
 
 0.684
GCA_000720925_03444
Unannotated protein.
    
  0.672
GCA_000720925_03043
Unannotated protein.
    
  0.668
GCA_000720925_02837
Unannotated protein.
    
 0.662
GCA_000720925_02332
Unannotated protein.
    
  0.658
GCA_000720925_02342
Unannotated protein.
    
 0.655
Your Current Organism:
Phycicoccus jejuensis
NCBI taxonomy Id: 367299
Other names: JCM 15616, KCCM 42315, NRRL B-24460, P. jejuensis, Phycicoccus jejuensis Lee 2006, strain KSW2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.