STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR92878.1Heavy-metal-associated domain protein. (67 aa)    
Predicted Functional Partners:
holB
DNA polymerase III subunit delta'.
       0.830
yaaT
Hypothetical protein; PSP1 C-terminal conserved region.
       0.830
AQR92875.1
Hypothetical protein.
  
    0.808
AQR93835.1
EcsC protein family protein.
  
 0.798
cadA
Cadmium, zinc and cobalt-transporting ATPase.
  
 0.798
AQR95602.1
EcsC protein family protein.
  
 0.798
AQR96098.1
Hypothetical protein.
  
 0.798
copA_1
Copper-exporting P-type ATPase A.
  
 0.798
copA_3
Copper-exporting P-type ATPase A.
  
 0.798
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.673
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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