Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sleBSpore cortex-lytic enzyme precursor. (202 aa)    
Predicted Functional Partners:
spoVAD_2
Stage V sporulation protein AD.
  
  
 0.819
spoVAC2
SpoVA protein.
  
  
 0.812
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.810
spoVAD_1
Stage V sporulation protein AD.
  
  
 0.802
ytfJ
Putative spore protein YtfJ.
  
  
 0.789
spoVAC1
SpoVA protein.
  
  
 0.781
spoIIR
Stage II sporulation protein SpoIIR.
 
   
 0.716
spoIIP
Stage II sporulation protein SpoIIP.
  
  
 0.712
spoVT_1
Stage V sporulation protein T.
  
   
 0.703
spoIIE
Stage II sporulation protein E.
  
   
 0.687
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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