Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
cbgA_1Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (935 aa)    
Predicted Functional Partners:
tabA
Toxin-antitoxin biofilm protein TabA.
 
 
 0.780
agaA
Alpha-galactosidase A precursor.
 
   
 0.700
AQR92985.1
Hypothetical protein.
       0.637
AQR97693.1
Beta-1,4-mannooligosaccharide phosphorylase.
 
    0.527
hypBA1_2
Non-reducing end beta-L-arabinofuranosidase.
 
   
 0.524
ramA2
Bacterial alpha-L-rhamnosidase.
 
 
 
 0.519
AQR97380.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.509
AQR92984.1
alpha-L-fucosidase.
 
   
 0.500
xynB1
Alpha/beta hydrolase fold protein.
 
 
 0.499
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
   
 0.479
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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