STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dhbFDimodular nonribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. (571 aa)    
Predicted Functional Partners:
mbtB
Phenyloxazoline synthase MbtB.
 
0.999
AQR94628.1
long-chain-fatty-acid--AMP ligase FadD32.
0.999
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
 
0.999
grsB
Gramicidin S synthase 2.
 
0.999
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
AQR97917.1
long-chain-fatty-acid--AMP ligase FadD29.
 
 0.999
tycC
Tyrocidine synthase 3; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.998
lgrE_1
Linear gramicidin dehydrogenase LgrE.
 
 
 0.990
lgrE_2
Linear gramicidin dehydrogenase LgrE.
 
 
 0.990
lgrE_3
Linear gramicidin dehydrogenase LgrE.
 
 
 0.990
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.