Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | pabA_1 | CLSAP_50540 | CLSAP_03140 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminodeoxychorismate/anthranilate synthase component 2. | 0.963 |
| aroC | pabA_2 | CLSAP_50540 | CLSAP_27870 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminodeoxychorismate synthase component 2. | 0.984 |
| aroC | pabB | CLSAP_50540 | CLSAP_03150 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminodeoxychorismate synthase component 1. | 0.969 |
| aroC | pheA | CLSAP_50540 | CLSAP_50530 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | P-protein. | 0.999 |
| aroC | trpA | CLSAP_50540 | CLSAP_27920 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.793 |
| aroC | trpB | CLSAP_50540 | CLSAP_27910 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.657 |
| aroC | trpC | CLSAP_50540 | CLSAP_27890 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.564 |
| aroC | trpD | CLSAP_50540 | CLSAP_27880 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.846 |
| aroC | trpF | CLSAP_50540 | CLSAP_27900 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.551 |
| ilvE | pabA_1 | CLSAP_03160 | CLSAP_03140 | Putative branched-chain-amino-acid aminotransferase. | Aminodeoxychorismate/anthranilate synthase component 2. | 0.996 |
| ilvE | pabA_2 | CLSAP_03160 | CLSAP_27870 | Putative branched-chain-amino-acid aminotransferase. | Aminodeoxychorismate synthase component 2. | 0.936 |
| ilvE | pabB | CLSAP_03160 | CLSAP_03150 | Putative branched-chain-amino-acid aminotransferase. | Aminodeoxychorismate synthase component 1. | 0.997 |
| ilvE | pheA | CLSAP_03160 | CLSAP_50530 | Putative branched-chain-amino-acid aminotransferase. | P-protein. | 0.825 |
| ilvE | trpD | CLSAP_03160 | CLSAP_27880 | Putative branched-chain-amino-acid aminotransferase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.587 |
| pabA_1 | aroC | CLSAP_03140 | CLSAP_50540 | Aminodeoxychorismate/anthranilate synthase component 2. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.963 |
| pabA_1 | ilvE | CLSAP_03140 | CLSAP_03160 | Aminodeoxychorismate/anthranilate synthase component 2. | Putative branched-chain-amino-acid aminotransferase. | 0.996 |
| pabA_1 | pabA_2 | CLSAP_03140 | CLSAP_27870 | Aminodeoxychorismate/anthranilate synthase component 2. | Aminodeoxychorismate synthase component 2. | 0.817 |
| pabA_1 | pabB | CLSAP_03140 | CLSAP_03150 | Aminodeoxychorismate/anthranilate synthase component 2. | Aminodeoxychorismate synthase component 1. | 0.999 |
| pabA_1 | pheA | CLSAP_03140 | CLSAP_50530 | Aminodeoxychorismate/anthranilate synthase component 2. | P-protein. | 0.938 |
| pabA_1 | trpA | CLSAP_03140 | CLSAP_27920 | Aminodeoxychorismate/anthranilate synthase component 2. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.971 |
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