Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rfbMMannose-1-phosphate guanylyltransferase RfbM. (88 aa)    
Predicted Functional Partners:
algA_2
Alginate biosynthesis protein AlgA.
 
     0.839
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.773
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.699
rmlD_2
dTDP-4-dehydrorhamnose reductase.
  
  
 0.676
pgcA
Phosphoglucomutase.
  
 
 0.666
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.644
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
 0.644
gmd
GDP-mannose 4,6-dehydratase.
  
 
 0.632
AQR96967.1
Hypothetical protein.
  
 
 0.613
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 
 0.613
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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