Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cwlCSporulation-specific N-acetylmuramoyl-L-alanine amidase. (168 aa)    
Predicted Functional Partners:
lytA_9
Autolysin.
  
  
  0.934
toxB_2
Toxin B.
  
  
  0.922
amiC
N-acetylmuramoyl-L-alanine amidase AmiC precursor.
     
  0.900
amiA
N-acetylmuramoyl-L-alanine amidase AmiA precursor.
     
  0.900
lytA_2
Autolysin.
      0.803
mepH_2
Murein DD-endopeptidase MepH precursor.
  
 0.722
toxA_6
Toxin A.
 
 
 0.706
ykuD
Putative L,D-transpeptidase YkuD.
    
 0.654
fliK
Flagellar hook-length control protein FliK.
  
    0.624
lytA_34
Autolysin.
 
 
 0.589
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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