Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR93123.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
AQR93124.1
Hypothetical protein.
       0.757
AQR93672.1
Thermophilic serine proteinase precursor.
  
  
 0.606
AQR93122.1
Hypothetical protein.
       0.558
grsB
Gramicidin S synthase 2.
   
  
 0.508
AQR94230.1
FHA domain protein.
  
  
 0.485
garA
Glycogen accumulation regulator GarA.
  
  
 0.485
fhaB
FHA domain-containing protein FhaB.
  
  
 0.485
dhbF
Dimodular nonribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
  
 0.483
AQR93065.1
Calcium-transporting ATPase.
   
  
 0.470
yoaB
Calcium-transporting ATPase 1.
   
  
 0.470
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.