STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR93123.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
AQR93124.1
Hypothetical protein.
       0.757
AQR93498.1
Hypothetical protein.
  
 
 0.585
AQR93491.1
Hypothetical protein.
  
 
 0.565
smc_3
Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.565
AQR95984.1
Hypothetical protein.
  
 
 0.565
AQR93122.1
Hypothetical protein.
  
    0.561
AQR98253.1
Hypothetical protein.
  
 
 0.543
AQR93672.1
Thermophilic serine proteinase precursor.
  
  
 0.528
grsB
Gramicidin S synthase 2.
   
  
 0.468
AQR94230.1
FHA domain protein.
  
  
 0.447
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.