Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93164.1Putative AAA-ATPase. (565 aa)    
Predicted Functional Partners:
algA_2
Alginate biosynthesis protein AlgA.
       0.714
AQR93273.1
Putative AAA-ATPase.
 
    0.674
dnaC_2
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.662
pin
Recombinase.
     
 0.479
AQR93162.1
Hypothetical protein.
       0.468
AQR95980.1
PD-(D/E)XK nuclease family transposase.
  
     0.467
dnaQ
DNA polymerase III subunit epsilon.
 
   
 0.465
AQR94419.1
PD-(D/E)XK nuclease family transposase.
  
     0.429
ydeA_2
Putative protease YdeA.
  
     0.416
AQR98229.1
Replication initiation and membrane attachment.
 
  
 0.403
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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