Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR93176.1Iron hydrogenase 1. (526 aa)    
Predicted Functional Partners:
hndC_3
NADP-reducing hydrogenase subunit HndC.
 
 0.982
hndC_2
NADP-reducing hydrogenase subunit HndC.
 
 0.976
hndC_1
NADP-reducing hydrogenase subunit HndC.
 
 0.973
hndA
NADP-reducing hydrogenase subunit HndA.
 
 0.903
gltD_4
Glutamate synthase [NADPH] small chain.
   
 0.869
sfrB_3
NADPH-Fe(3+) oxidoreductase subunit beta.
 
 
 0.844
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.827
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.827
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 0.793
korA
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.705
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.