rluB_1 protein (Clostridium saccharoperbutylacetonicum)

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rluB_1

Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (238 aa)

Predicted Functional Partners:

exoA

0.815

der_1

0.785

cmk_1

0.755

rplU

0.643

scpB

0.642

rluD_1

0.640

rplT

0.577

rluD_2

0.575

der_2

0.536

era_2

0.536

Your Current Organism:

Clostridium saccharoperbutylacetonicum

NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cmk_1	der_1	CLSAP_30650	CLSAP_12400	Cytidylate kinase.	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.987
cmk_1	der_2	CLSAP_30650	CLSAP_35840	Cytidylate kinase.	GTPase Der.	0.748
cmk_1	era_2	CLSAP_30650	CLSAP_41490	Cytidylate kinase.	GTPase Era.	0.748
cmk_1	rluB_1	CLSAP_30650	CLSAP_04680	Cytidylate kinase.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.755
cmk_1	rplU	CLSAP_30650	CLSAP_49460	Cytidylate kinase.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.441
cmk_1	scpB	CLSAP_30650	CLSAP_25860	Cytidylate kinase.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.854
der_1	cmk_1	CLSAP_12400	CLSAP_30650	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Cytidylate kinase.	0.987
der_1	rluB_1	CLSAP_12400	CLSAP_04680	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.785
der_1	rluD_1	CLSAP_12400	CLSAP_24610	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.685
der_1	rluD_2	CLSAP_12400	CLSAP_49380	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.510
der_1	rplT	CLSAP_12400	CLSAP_24370	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.820
der_1	rplU	CLSAP_12400	CLSAP_49460	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.782
der_1	scpB	CLSAP_12400	CLSAP_25860	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.700
der_2	cmk_1	CLSAP_35840	CLSAP_30650	GTPase Der.	Cytidylate kinase.	0.748
der_2	rluB_1	CLSAP_35840	CLSAP_04680	GTPase Der.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.536
der_2	rplT	CLSAP_35840	CLSAP_24370	GTPase Der.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.663
der_2	rplU	CLSAP_35840	CLSAP_49460	GTPase Der.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.649
der_2	scpB	CLSAP_35840	CLSAP_25860	GTPase Der.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.633
era_2	cmk_1	CLSAP_41490	CLSAP_30650	GTPase Era.	Cytidylate kinase.	0.748
era_2	rluB_1	CLSAP_41490	CLSAP_04680	GTPase Era.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.536

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