Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
nfuAFe/S biogenesis protein NfuA. (73 aa)    
Predicted Functional Partners:
iscS_2
Cysteine desulfurase IscS.
 
 0.901
iscS_1
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
 
 0.895
AQR97735.1
Hypothetical protein.
  
 
 0.852
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.836
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.836
pdhC
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.815
hcnB_3
Hydrogen cyanide synthase subunit HcnB.
  
  
 0.802
hcr
NADH oxidoreductase hcr.
  
 
 0.799
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
 
 0.711
AQR94675.1
Hypothetical protein.
  
 
 0.711
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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