STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yyaCHypothetical protein. (178 aa)    
Predicted Functional Partners:
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.842
spoIIIAE
Stage III sporulation protein AE precursor.
  
     0.755
spoVT_1
Stage V sporulation protein T.
  
  
 0.753
spoIIIAD
Stage III sporulation protein AC/AD protein family protein.
  
     0.738
spoIIE
Stage II sporulation protein E.
  
     0.736
spoIIR
Stage II sporulation protein SpoIIR.
  
     0.722
spoIIIAF
Hypothetical protein.
  
     0.721
spoIIIAB
Stage III sporulation protein SpoAB.
  
     0.719
spoIIID
Stage III sporulation protein D.
  
     0.713
tepA
Translocation-enhancing protein TepA.
  
   
 0.688
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.