Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93376.1CAAX amino terminal protease self- immunity. (277 aa)    
Predicted Functional Partners:
AQR96024.1
Hypothetical protein.
  
     0.666
AQR93228.1
ABC-2 family transporter protein.
  
  
 0.568
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
       0.567
phoP_1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
     
 0.555
AQR93229.1
ABC-2 family transporter protein.
  
  
 0.542
AQR94986.1
Hypothetical protein.
  
    0.510
AQR96483.1
Hypothetical protein.
  
 
 
 0.496
sigI
RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
  
     0.468
AQR97628.1
Hypothetical protein.
  
     0.467
rsxB_4
Electron transport complex subunit RsxB.
  
  
 0.466
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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