Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93425.1Amidohydrolase. (336 aa)    
Predicted Functional Partners:
AQR93424.1
NADH oxidase.
  
    0.748
proA_2
4-hydroxy-4-methyl-2-oxoglutarate aldolase.
 
  
 0.657
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
 0.619
mii
3-methylitaconate isomerase.
 
  
 0.570
ald
3-succinoylsemialdehyde-pyridine dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.518
AQR93423.1
DNA-binding transcriptional repressor FabR.
       0.492
AQR96087.1
Hypothetical protein; Belongs to the UPF0311 family.
 
  
 0.448
gbsA
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.442
mdlD
NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.442
gapN
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.442
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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