STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mopAldehyde oxidoreductase. (909 aa)    
Predicted Functional Partners:
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 0.996
pucA
Putative xanthine dehydrogenase subunit A.
 
 
 0.990
xdhA
Xanthine dehydrogenase molybdenum-binding subunit.
 
0.969
mocA
Molybdenum cofactor cytidylyltransferase.
 
 
 0.955
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
 
  
 0.954
cdhC
Caffeine dehydrogenase subunit gamma.
 
0.942
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.933
AQR93439.1
Hypothetical protein.
 
     0.911
moaA_2
Cyclic pyranopterin monophosphate synthase.
 
     0.904
rebM_1
demethylrebeccamycin-D-glucose O-methyltransferase.
 
    0.899
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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