STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rebM_1demethylrebeccamycin-D-glucose O-methyltransferase. (237 aa)    
Predicted Functional Partners:
AQR93439.1
Hypothetical protein.
 
     0.962
AQR93441.1
Putative redox-active protein.
 
     0.957
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
 
  
 0.949
moaA_2
Cyclic pyranopterin monophosphate synthase.
 
     0.949
mop
Aldehyde oxidoreductase.
 
    0.899
paaK
Phenylacetate-coenzyme A ligase.
 
  
 0.893
mocA
Molybdenum cofactor cytidylyltransferase.
 
     0.875
pucA
Putative xanthine dehydrogenase subunit A.
 
    0.813
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
    
 0.687
pspA_1
Phosphoserine phosphatase 1.
 
     0.679
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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