STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
moaA_2Cyclic pyranopterin monophosphate synthase. (437 aa)    
Predicted Functional Partners:
mocA
Molybdenum cofactor cytidylyltransferase.
     0.961
AQR93441.1
Putative redox-active protein.
 
     0.952
AQR93439.1
Hypothetical protein.
 
     0.947
rebM_1
demethylrebeccamycin-D-glucose O-methyltransferase.
 
     0.943
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
 
     0.941
mop
Aldehyde oxidoreductase.
 
     0.908
paaK
Phenylacetate-coenzyme A ligase.
 
     0.870
pucA
Putative xanthine dehydrogenase subunit A.
 
     0.845
pspA_1
Phosphoserine phosphatase 1.
 
     0.656
cinA_1
Putative competence-damage inducible protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.592
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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