STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pucAPutative xanthine dehydrogenase subunit A. (342 aa)    
Predicted Functional Partners:
mop
Aldehyde oxidoreductase.
 
 
 0.990
mocA
Molybdenum cofactor cytidylyltransferase.
 
  
 0.982
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 
 0.968
xdhA
Xanthine dehydrogenase molybdenum-binding subunit.
 
 
 0.965
cdhC
Caffeine dehydrogenase subunit gamma.
 
 
 0.958
paaK
Phenylacetate-coenzyme A ligase.
     0.915
moaA_2
Cyclic pyranopterin monophosphate synthase.
 
     0.861
AQR93439.1
Hypothetical protein.
 
     0.843
pspA_1
Phosphoserine phosphatase 1.
       0.838
AQR93441.1
Putative redox-active protein.
 
     0.829
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.