Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaKPhenylacetate-coenzyme A ligase. (441 aa)    
Predicted Functional Partners:
hcr
NADH oxidoreductase hcr.
  
 
 0.946
mocA
Molybdenum cofactor cytidylyltransferase.
 
     0.923
pucA
Putative xanthine dehydrogenase subunit A.
     0.911
rebM_1
demethylrebeccamycin-D-glucose O-methyltransferase.
 
  
 0.881
AQR93441.1
Putative redox-active protein.
 
     0.880
AQR93439.1
Hypothetical protein.
 
     0.879
moaA_2
Cyclic pyranopterin monophosphate synthase.
 
     0.870
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
 
   
 0.855
mop
Aldehyde oxidoreductase.
 
     0.847
moaA_3
Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.773
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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