Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR93500.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AQR93503.1
Hypothetical protein.
 
 
 0.977
AQR93504.1
Baseplate J-like protein.
 
 
 0.974
AQR93505.1
Hypothetical protein.
 
 
 0.964
AQR93495.1
Phage tail sheath protein.
 
 
 0.955
xkdQ1
Hypothetical protein.
 
 
 
 0.947
AQR98116.1
Phage tail sheath protein.
 
 
 0.944
xkdK
Phage tail sheath protein.
 
 
 0.943
AQR98106.1
Baseplate J-like protein.
 
 
 0.935
AQR93520.1
Baseplate J-like protein.
 
 
 0.934
AQR95575.1
Baseplate J-like protein.
 
 
 0.934
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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