Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR93537.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
AQR93536.1
Hypothetical protein.
       0.825
spoVAC2
SpoVA protein.
 
  
 0.668
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.652
spoVAD_2
Stage V sporulation protein AD.
 
  
 0.652
spoVAEB2
SpoVA protein.
 
  
 0.649
ydbD
Putative manganese catalase.
 
   
 0.648
spoVAD_1
Stage V sporulation protein AD.
 
  
 0.645
spoVAC1
SpoVA protein.
 
  
 0.644
sleB
Spore cortex-lytic enzyme precursor.
  
     0.614
spoVAEB1
SpoVA protein.
 
  
 0.613
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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