STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpPGlycerol-3-phosphate responsive antiterminator. (206 aa)    
Predicted Functional Partners:
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.883
glpK_1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
 
 0.866
AQR93544.1
Hypothetical protein.
 
    0.849
lhgO
L-2-hydroxyglutarate oxidase LhgO.
 
     0.838
hcnB_1
Hydrogen cyanide synthase subunit HcnB.
 
    0.806
AQR93232.1
ferredoxin--NADP reductase.
 
    0.698
soxA
Monomeric sarcosine oxidase.
 
     0.691
glpK_3
Glycerol kinase.
  
 
 0.665
glcT
PtsGHI operon antiterminator.
  
  
 0.464
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
    0.452
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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