Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lacA_1Galactoside O-acetyltransferase. (198 aa)    
Predicted Functional Partners:
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.660
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.655
fdtB
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.655
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN.
  
 
 0.655
wbpE
UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.655
rmlD_2
dTDP-4-dehydrorhamnose reductase.
  
  
 0.545
rfbD
UDP-galactopyranose mutase precursor.
  
 
 0.534
tuaA_1
Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
  
  
 0.501
tuaA_2
Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
  
  
 0.501
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.501
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.