STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacG_1Lactose transport system permease protein LacG. (277 aa)    
Predicted Functional Partners:
lacF_1
Lactose transport system permease protein LacF.
 0.999
lacE_1
Lactose-binding protein precursor.
 
 0.991
ugpA_1
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 0.954
lacF_2
Lactose transport system permease protein LacF.
 0.954
ugpA_3
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 0.954
lacF_3
Lactose transport system permease protein LacF.
 0.953
araP_3
L-arabinose transport system permease protein AraP.
 
 0.952
araP_4
L-arabinose transport system permease protein AraP.
 
 0.951
ycjO_1
Inner membrane ABC transporter permease protein YcjO.
 
 0.949
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.930
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.