STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglYBeta-galactosidase BglY. (694 aa)    
Predicted Functional Partners:
rafA_1
Alpha-galactosidase.
 
  
 0.941
rafA_3
Alpha-galactosidase.
 
  
 0.941
rafA_2
Alpha-galactosidase.
 
  
 0.940
cbgA_2
Beta-galactosidase.
 
 0.937
agaA
Alpha-galactosidase A precursor.
 
 
 0.935
lacZ
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 0.928
ebgA
Evolved beta-galactosidase subunit alpha.
  
 0.928
mro
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
  
 
 0.923
AQR96390.1
Ankyrin repeat protein.
   
 0.788
yicI_2
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.684
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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