Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rsxB_2Electron transport complex subunit RsxB. (245 aa)    
Predicted Functional Partners:
hndA
NADP-reducing hydrogenase subunit HndA.
   
 0.695
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
    
 0.608
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
    
 0.608
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 0.498
AQR96562.1
D-hydantoinase.
  
 0.498
nadB_1
L-aspartate oxidase.
       0.496
nadC
Putative nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
       0.496
AQR94571.1
Ferredoxin.
 
 
 
 0.495
sfrB_4
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.489
AQR93609.1
Universal stress protein family protein.
  
    0.483
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.