STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR93624.1TspO/MBR family protein. (166 aa)    
Predicted Functional Partners:
AQR93609.1
Universal stress protein family protein.
  
  
 0.524
lon
Lon protease.
       0.501
AQR97949.1
Hypothetical protein; Belongs to the UPF0761 family.
   
  
 0.487
corA_1
Magnesium transport protein CorA.
  
    0.477
dagK
Diacylglycerol kinase.
   
  
 0.470
AQR95509.1
Homocitrate synthase.
  
    0.462
crtN
Dehydrosqualene desaturase.
  
  
 0.429
AQR94621.1
Coproporphyrinogen III oxidase.
  
    0.428
pip3
ABC-2 family transporter protein.
       0.423
AQR95906.1
Hypothetical protein.
  
    0.421
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.