Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lonLon protease. (768 aa)    
Predicted Functional Partners:
ugtP
Processive diacylglycerol beta-glucosyltransferase.
   
    0.501
AQR93624.1
TspO/MBR family protein.
       0.501
tepA
Translocation-enhancing protein TepA.
  
  
 0.493
mnmG_1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG.
  
    0.462
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.447
ttuE
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.400
pyk_1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.400
pyk_2
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.400
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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