Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93633.1ComEC family competence protein. (563 aa)    
Predicted Functional Partners:
AQR93632.1
Calcium-transporting ATPase 1.
 
    0.862
dprA
Hypothetical protein.
 
  
 0.827
prs_2
Ribose-phosphate pyrophosphokinase.
 
  
 0.821
comM
Competence protein ComM.
 
  
 0.731
comEA
ComE operon protein 1.
  
  
 0.718
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
  
 0.690
comC
Type 4 prepilin-like proteins leader peptide-processing enzyme.
  
  
 0.666
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
    0.660
barA_2
Signal transduction histidine-protein kinase BarA.
  
    0.660
AQR93345.1
Hypothetical protein.
   
  
 0.644
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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