Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| spoIIE | spoIIGA | CLSAP_01230 | CLSAP_12260 | Stage II sporulation protein E. | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.973 |
| spoIIE | spoIIIAA | CLSAP_01230 | CLSAP_24820 | Stage II sporulation protein E. | Hypothetical protein. | 0.839 |
| spoIIE | spoIIIAE | CLSAP_01230 | CLSAP_24860 | Stage II sporulation protein E. | Stage III sporulation protein AE precursor. | 0.784 |
| spoIIE | spoIIID | CLSAP_01230 | CLSAP_06330 | Stage II sporulation protein E. | Stage III sporulation protein D. | 0.871 |
| spoIIE | spoIIP | CLSAP_01230 | CLSAP_09440 | Stage II sporulation protein E. | Stage II sporulation protein SpoIIP. | 0.952 |
| spoIIE | spoIIR | CLSAP_01230 | CLSAP_06020 | Stage II sporulation protein E. | Stage II sporulation protein SpoIIR. | 0.943 |
| spoIIE | spoIVA | CLSAP_01230 | CLSAP_12420 | Stage II sporulation protein E. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.902 |
| spoIIE | ylbJ | CLSAP_01230 | CLSAP_12670 | Stage II sporulation protein E. | Sporulation integral membrane protein YlbJ. | 0.749 |
| spoIIE | yqfC | CLSAP_01230 | CLSAP_09660 | Stage II sporulation protein E. | YabP family protein. | 0.730 |
| spoIIE | yqfd | CLSAP_01230 | CLSAP_09670 | Stage II sporulation protein E. | Putative stage IV sporulation protein YqfD. | 0.778 |
| spoIIGA | spoIIE | CLSAP_12260 | CLSAP_01230 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein E. | 0.973 |
| spoIIGA | spoIIIAA | CLSAP_12260 | CLSAP_24820 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein. | 0.687 |
| spoIIGA | spoIIIAE | CLSAP_12260 | CLSAP_24860 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein AE precursor. | 0.770 |
| spoIIGA | spoIIID | CLSAP_12260 | CLSAP_06330 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein D. | 0.782 |
| spoIIGA | spoIIP | CLSAP_12260 | CLSAP_09440 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein SpoIIP. | 0.910 |
| spoIIGA | spoIIR | CLSAP_12260 | CLSAP_06020 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein SpoIIR. | 0.933 |
| spoIIGA | spoIVA | CLSAP_12260 | CLSAP_12420 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.735 |
| spoIIGA | ylbJ | CLSAP_12260 | CLSAP_12670 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation integral membrane protein YlbJ. | 0.535 |
| spoIIGA | yqfC | CLSAP_12260 | CLSAP_09660 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | YabP family protein. | 0.590 |
| spoIIGA | yqfd | CLSAP_12260 | CLSAP_09670 | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative stage IV sporulation protein YqfD. | 0.797 |
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